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Package: aevol (5.0-1)

digital genetics model to run Evolution Experiments in silico

Aevol is a digital genetics model: populations of digital organisms are subjected to a process of selection and variation, which creates a Darwinian dynamics.

By modifying the characteristics of selection (e.g. population size, type of environment, environmental variations) or variation (e.g. mutation rates, chromosomal rearrangement rates, types of rearrangements, horizontal transfer), one can study experimentally the impact of these parameters on the structure of the evolved organisms. In particular, since Aevol integrates a precise and realistic model of the genome, it allows for the study of structural variations of the genome (e.g. number of genes, synteny, proportion of coding sequences).

The simulation platform comes along with a set of tools for analysing phylogenies and measuring many characteristics of the organisms and populations along evolution.

Other Packages Related to aevol

  • depends
  • recommends
  • suggests
  • dep: libboost-filesystem1.65.1
    filesystem operations (portable paths, iteration over directories, etc) in C++
  • dep: libboost-system1.65.1
    Operating system (e.g. diagnostics support) library
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc1 (>= 1:3.0) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.2) [i386]
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: libx11-6
    X11 client-side library
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Download aevol

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 523.1 kB4718 kB [list of files]
i386 546.8 kB5030 kB [list of files]