Skip to content
Sections
>> Trisquel >> Packages >> etiona >> python >> python-pbcommand
etiona  ]
[ Source: python-pbcommand  ]

Package: python-pbcommand (0.5.3-1)

common command-line interface for Pacific Biosciences analysis modules

To integrate with the pbsmrtpipe workflow engine, one must to be able to generate a Tool Contract and to be able to run from a Resolved Tool Contract. A Tool Contract contains the metadata of the exe, such as the file types of inputs, outputs and options. There are two principal use cases, first wrapping/calling Python functions that have been defined in external Python packages, or scripts. Second, creating a CLI tool that supports emitting tool contracts, running resolved tool contracts and complete argparse-style CLI.

Other Packages Related to python-pbcommand

  • depends
  • recommends
  • suggests
  • dep: python
    interactive high-level object-oriented language (default version)
  • dep: python-avro
    Apache Avro serialization system — Python 2 library
  • dep: python-iso8601
    Python module to parse ISO 8601 dates - Python 2.x
  • dep: python-numpy
    Numerical Python adds a fast array facility to the Python language
  • dep: python-requests
    elegant and simple HTTP library for Python2, built for human beings
  • rec: python-pbcore
    Python library for processing PacBio data files

Download python-pbcommand

Download for all available architectures
Architecture Package Size Installed Size Files
all 77.8 kB407 kB [list of files]