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Package: python-cobra (0.5.9-1build2)

constraint-based modeling of biological networks (Python 2)

COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes. COBRApy is a constraint-based modeling package that is designed to accommodate the biological complexity of the next generation of COBRA models and provides access to commonly used COBRA methods, such as flux balance analysis, flux variability analysis, and gene deletion analyses.

This package provides the Python 2 module.

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    also a virtual package provided by libc6-udeb
  • dep: libglpk40 (>= 4.59)
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  • dep: python
    interactive high-level object-oriented language (default version)
    dep: python (<< 2.8)
    dep: python (>= 2.7~)
  • dep: python-cobra-data (= 0.5.9-1build2)
    constraint-based modeling of biological networks (data)
  • dep: python-six
    Python 2 and 3 compatibility library (Python 2 interface)
  • rec: libsbml5-python
    System Biology Markup Language library - Python bindings
  • rec: python-numpy
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  • rec: python-pandas
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  • rec: python-scipy
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  • sug: python-matplotlib
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  • sug: qsopt-ex
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amd64 164.9 kB774 kB [list of files]
i386 160.2 kB776 kB [list of files]