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Package: science-neuroscience-cognitive (1.7ubuntu3)

Debian Science packages for Cognitive Neuroscience

This metapackage will install Debian packages which might be useful for scientists doing cognitive neuroscience research. This comprises the full research process from conducting psychophysical experiments, over data acquisition and analysis, to visualization and typesetting of scientific results.

The selection of packages is targeting the application of analysis techniques. Methods developers are referred to the science-statistics, science-imageanalysis, science-numericalcomputation, med-imaging, and med-imaging-dev metapackages for a variety of additional software that might be useful in the context of cognitive neuroscience.

Other Packages Related to science-neuroscience-cognitive

  • depends
  • recommends
  • suggests
  • dep: science-config (= 1.7ubuntu3)
    Debian Science Project config package
  • dep: science-tasks (= 1.7ubuntu3)
    Debian Science tasks for tasksel
  • rec: amide
    software for Medical Imaging
  • rec: dicom3tools
    DICOM medical image files manipulation and conversion tools
  • rec: dicomnifti
    converts DICOM files into the NIfTI format
  • rec: itksnap
    semi-automatic segmentation of structures in 3D images
  • rec: medcon
    Medical Image (DICOM, ECAT, ...) conversion tool
  • rec: minc-tools
    MNI medical image format tools
  • rec: mriconvert
    medical image file conversion utility
  • rec: mricron
    magnetic resonance image conversion, viewing and analysis
  • rec: nifti-bin
    tools shipped with the NIfTI library
  • rec: nifti2dicom
    convert 3D medical images to DICOM 2D series
  • rec: praat
    program for speech analysis and synthesis
  • rec: psignifit
    Fitting and testing hypotheses about psychometric functions
  • rec: python-dicom
    DICOM medical file reading and writing (Python 2)
  • rec: python-mvpa2
    multivariate pattern analysis with Python v. 2
  • rec: python-nibabel
    Python bindings to various neuroimaging data formats
  • rec: python-nitime
    timeseries analysis for neuroscience data (nitime)
  • rec: python-pyxnat
    Interface to access neuroimaging data on XNAT servers
  • rec: python-statsmodels
    Python module for the estimation of statistical models
  • rec: qnifti2dicom
    convert 3D medical images to DICOM 2D series (gui)
  • rec: voxbo
    processing, statistical analysis, and display of brain imaging data
  • rec: xmedcon
    Medical Image (DICOM, ECAT, ...) conversion tool (GUI)
  • sug: afni
    Package not available
  • sug: bioimagesuite
    Package not available
  • sug: brainvisa
    Package not available
  • sug: caret
    Package not available
  • sug: connectomeviewer
    Interactive Analysis and Visualization for MR Connectomics
  • sug: debruijn
    Package not available
  • sug: eeglab
    Package not available
  • sug: fieldtrip
    Package not available
  • sug: freesurfer
    Package not available
  • sug: fsl
    Package not available
  • sug: fslview
    Package not available
  • sug: hid
    Package not available
  • sug: iqr
    Package not available
  • sug: lipsia
    Package not available
  • sug: mni-autoreg
    Package not available
  • sug: mni-n3
    Package not available
  • sug: openmeeg-tools
    Package not available
  • sug: openwalnut-qt4
    Package not available
  • sug: pysurfer
    Package not available
  • sug: python-dipy
    Python library for the analysis of diffusion MRI datasets
  • sug: python-nipy
    Analysis of structural and functional neuroimaging data
  • sug: python-nipype
    Neuroimaging data analysis pipelines in Python
  • sug: python-pyepl
    Package not available
  • sug: python-pypsignifit
    Package not available
  • sug: science-psychophysics
    Debian Science packages for Psychophysics
  • sug: science-typesetting
    Debian Science typesetting packages
  • sug: slicer
    Package not available
  • sug: spm8
    Package not available
  • sug: xnat
    Package not available

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