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[ Source: debian-med  ]

Package: med-imaging (3.0.1ubuntu1)

Debian Med image processing and visualization packages

This metapackage will install Debian packages which might be useful in medical image processing and visualization.

On one hand, it installs several packages supporting various image file formats and image management, like DICOM (Digital Imaging and Communications in Medicine) which is the de-facto standard for medical image management, and NIFTI. On the other hand, it provides a variety of software packages that can be used for visualization and for image processing - either from a graphical user interface, the command line, or implemented in workflows.

Other Packages Related to med-imaging

  • depends
  • recommends
  • suggests
  • dep: med-config (= 3.0.1ubuntu1)
    Debian Med general config package
  • dep: med-tasks (= 3.0.1ubuntu1)
    Debian Med tasks for tasksel
  • rec: aeskulap
    medical image viewer and DICOM network client
  • rec: amide
    software for Medical Imaging
  • rec: ants
    advanced normalization tools for brain and image analysis
  • rec: bart
    tools for computational magnetic resonance imaging
  • rec: biosig-tools
    format conversion tools for biomedical data formats
  • rec: camitk-imp
    workbench application for the CamiTK library
  • rec: ctn
    Central Test Node, a DICOM implementation for medical imaging
  • rec: ctsim
    Computed tomography simulator
  • rec: dcm2niix
    next generation DICOM to NIfTI converter
  • rec: dcmtk
    OFFIS DICOM toolkit command line utilities
  • rec: dicom3tools
    DICOM medical image files manipulation and conversion tools
  • rec: dicomnifti
    converts DICOM files into the NIfTI format
  • rec: dicomscope
    OFFIS DICOM Viewer
  • rec: gdf-tools
    IO library for the GDF -- helper tools
  • rec: ginkgocadx
    Medical Imaging Software and complete DICOM Viewer
  • rec: gwyddion
    Scanning Probe Microscopy visualization and analysis tool
  • rec: imagej
    Image processing program with a focus on microscopy images
  • rec: imagevis3d
    desktop volume rendering application for large data
  • rec: invesalius
    3D medical imaging reconstruction software
  • rec: ismrmrd-tools
    command-line tools for ISMRMRD
  • rec: itksnap
    semi-automatic segmentation of structures in 3D images
  • rec: king
    interactive system for three-dimensional vector graphics
  • rec: libgdcm-tools
    Grassroots DICOM tools and utilities
  • rec: medcon
    Medical Image (DICOM, ECAT, ...) conversion tool
  • rec: mia-tools
    Command line tools for gray scale image processing
  • rec: mia-viewit
    Viewer program for 3D data sets created by using MIA
  • rec: mialmpick
    Tools for landmark picking in 3D volume data sets
  • rec: mriconvert
    medical image file conversion utility
  • rec: mricron
    magnetic resonance image conversion, viewing and analysis
  • rec: mrtrix
    diffusion-weighted MRI white matter tractography
  • rec: nifti-bin
    tools shipped with the NIfTI library
  • rec: openslide-tools
    Manipulation and conversion tools for OpenSlide
  • rec: orthanc
    Lightweight, RESTful DICOM server for medical imaging
  • rec: orthanc-wsi
    Whole-slide imaging support for Orthanc (digital pathology)
  • rec: pixelmed-apps
    DICOM implementation containing Image Viewer and a ECG Viewer - jnlp
  • rec: plastimatch
    medical image reconstruction and registration
  • rec: python-dicom
    DICOM medical file reading and writing (Python 2)
  • rec: python-nibabel
    Python bindings to various neuroimaging data formats
  • rec: python-nipy
    Analysis of structural and functional neuroimaging data
  • rec: python-nipype
    Neuroimaging data analysis pipelines in Python
  • rec: python-nitime
    timeseries analysis for neuroscience data (nitime)
  • rec: python-surfer
    visualize Freesurfer's data in Python
  • rec: python-tifffile
    Read and write image data from and to TIFF files
  • rec: sigviewer
    GUI viewer for biosignals such as EEG, EMG, and ECG
  • rec: sofa-apps
    GUI for the Simulation Open Framework Architecture (SOFA)
  • rec: teem-apps
    Tools to process and visualize scientific data and images - command line tools
  • rec: voxbo
    processing, statistical analysis, and display of brain imaging data
  • rec: vtk-dicom-tools
    DICOM for VTK - tools
  • rec: xmedcon
    Medical Image (DICOM, ECAT, ...) conversion tool (GUI)
  • sug: afni
    Package not available
  • sug: bart-view
    viewer for multi-dimensional complex-valued data
  • sug: bioimagesuite
    Package not available
  • sug: bioimagexd
    Package not available
  • sug: blox
    Package not available
  • sug: brainvisa
    Package not available
  • sug: caret
    Package not available
  • sug: cdmedicpacs
    Package not available
  • sug: cellprofiler
    Package not available
  • sug: cmtk
    Computational Morphometry Toolkit
  • sug: connectomeviewer
    Interactive Analysis and Visualization for MR Connectomics
  • sug: conquest-common
    Package not available
  • sug: conquest-dbase
    Package not available
  • sug: conquest-mysql
    Package not available
  • sug: conquest-postgres
    Package not available
  • sug: conquest-sqlite
    Package not available
  • sug: crea
    Package not available
  • sug: dcm4chee
    Package not available
  • sug: devide
    Package not available
  • sug: dicom4j
    Package not available
  • sug: dicoogle
    Package not available
  • sug: drjekyll
    Package not available
  • sug: dti-query
    Package not available
  • sug: dtitk
    Package not available
  • sug: ecg2png
    Package not available
  • sug: eeglab
    Package not available
  • sug: elastix
    toolbox for rigid and nonrigid registration of images
  • sug: fiji
    Package not available
  • sug: freesurfer
    Package not available
  • sug: fsl
    Package not available
  • sug: fslview
    Package not available
  • sug: fw4spl
    Package not available
  • sug: gimias
    Package not available
  • sug: gofigure2
    Package not available
  • sug: hid
    Package not available
  • sug: imagemagick
    image manipulation programs -- binaries
    also a virtual package provided by graphicsmagick-imagemagick-compat, imagemagick-6.q16
  • sug: imview
    Image viewing and analysis application
  • sug: incf-nidash-oneclick-clients
    Package not available
  • sug: insightapplications
    Package not available
  • sug: isis
    Package not available
  • sug: jemris
    Package not available
  • sug: jist
    Package not available
  • sug: kradview
    Package not available
  • sug: libdcm4che-java
    Package not available
  • sug: lipsia
    Package not available
  • sug: maris
    Package not available
  • sug: mayam
    Package not available
  • sug: medisnap
    Package not available
  • sug: mesa-test-tools
    Package not available
  • sug: micromanager
    Package not available
  • sug: minc-tools
    MNI medical image format tools
  • sug: mipav
    Package not available
  • sug: miview
    Package not available
  • sug: mni-autoreg
    Package not available
  • sug: mni-colin27-nifti
    Package not available
  • sug: mni-icbm152-nlin-2009
    Package not available
  • sug: mni-n3
    Package not available
  • sug: mrisim
    Package not available
  • sug: omero
    Package not available
  • sug: opendicom.net
    Package not available
  • sug: openelectrophy
    Package not available
  • sug: openmeeg-tools
    Package not available
  • sug: opensourcepacs
    Package not available
  • sug: openwalnut-qt4
    Package not available
  • sug: orthanc-dicomweb
    Plugin to extend Orthanc with support of WADO and DICOMweb
  • sug: orthanc-imagej
    ImageJ plugin to import images from Orthanc
  • sug: orthanc-postgresql
    Plugins to use PostgreSQL as a database back-end to Orthanc
  • sug: orthanc-webviewer
    Web viewer of medical images for Orthanc
  • sug: paraview
    Parallel Visualization Application
  • sug: piano
    Package not available
  • sug: pngquant
    PNG (Portable Network Graphics) image optimising utility
  • sug: pymeg
    Package not available
  • sug: python-pyxid
    interface for Cedrus XID and StimTracker devices
  • sug: science-workflow
    workflow management systems useful for scientific research
  • sug: slicer
    Package not available
  • sug: stabilitycalc
    Package not available
  • sug: stir
    Package not available
  • sug: tempo
    Package not available
  • sug: trimage
    GUI and command-line interface to optimize image files
  • sug: via-bin
    Package not available
  • sug: visit
    Package not available
  • sug: vmtk
    Package not available
  • sug: volview
    Package not available
  • sug: xnat
    Package not available

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