Package: libseqlib0 (1.1.1+dfsg-5)
Links for libseqlib0
Trisquel Resources:
Download Source Package libseqlib:
- [libseqlib_1.1.1+dfsg-5.dsc]
- [libseqlib_1.1.1+dfsg.orig.tar.xz]
- [libseqlib_1.1.1+dfsg-5.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Homepage [github.com]
Similar packages:
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.
Other Packages Related to libseqlib0
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download libseqlib0
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
amd64 | 111.8 kB | 338 kB | [list of files] |