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Package: libmems-1.6-dev (1.6.0+4725-4build1)

development library to support DNA string matching and comparative genomics

libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.

This is the development package containing the statically linked library and the header files.

Packages providing libmems-1.6-dev

libmems-1.6-dev
development library to support DNA string matching and comparative genomics

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amd64 886.4 kB6702 kB [list of files]
i386 905.5 kB5618 kB [list of files]