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Package: clustalw (2.1+lgpl-5)

Links for clustalw

clustalw

Trisquel Resources:

Download Source Package clustalw:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Charles Plessy
  • Andreas Tille

External Resources:

Similar packages:

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

Other Packages Related to clustalw

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • sug: clustalx
    Package not available
  • sug: seaview
    Package not available
  • enh: bioperl-run
    BioPerl wrappers: scripts
  • enh: emboss
    European molecular biology open software suite
  • enh: t-coffee
    Multiple Sequence Alignment

Download clustalw

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 274.0 kB790 kB [list of files]
i386 284.5 kB825 kB [list of files]