Skip to content
Sections
>> Trisquel >> Packages >> etiona >> science >> ncbi-blast+
etiona  ] [  nabia  ] [  aramo  ]
[ Source: ncbi-blast+  ]

Package: ncbi-blast+ (2.6.0-1)

Links for ncbi-blast+

ncbi-blast+

Trisquel Resources:

Download Source Package ncbi-blast+:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Olivier Sallou
  • Andreas Tille
  • Aaron M. Ucko

External Resources:

Similar packages:

next generation suite of BLAST sequence search tools

The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service.

Other Packages Related to ncbi-blast+

  • depends
  • recommends
  • suggests
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc1 (>= 1:3.4) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.2) [i386]
  • dep: libgnutls30 (>= 3.5.6)
    GNU TLS library - main runtime library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libpcre3
    Old Perl 5 Compatible Regular Expression Library - runtime files
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: ncbi-data
    Platform-independent data for the NCBI toolkit
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python
    interactive high-level object-oriented language (default version)
  • dep: zlib1g (>= 1:1.2.0)
    compression library - runtime
  • enh: t-coffee
    Multiple Sequence Alignment

Download ncbi-blast+

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 9,224.7 kB39314 kB [list of files]
i386 10,002.4 kB39213 kB [list of files]