Paket: murasaki (1.68.6-9build2)

Links für murasaki

Trisquel-Ressourcen:

Quellcode-Paket murasaki herunterladen:

Betreuer:

Debian Med Packaging Team (E-Mail-Archiv)

Original Maintainers:

Debian Med Packaging Team (E-Mail-Archiv)
Andreas Tille

Externe Ressourcen:

Homepage [murasaki.dna.bio.keio.ac.jp]

homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

Andere Pakete mit Bezug zu murasaki

hängt ab von

empfiehlt

schlägt vor

dep: libboost-filesystem1.71.0

filesystem operations (portable paths, iteration over directories, etc) in C++
dep: libboost-iostreams1.71.0

Boost.Iostreams Library
dep: libboost-regex1.71.0-icu66

virtuelles Paket, bereitgestellt durch libboost-regex1.71.0
dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
dep: libgcc-s1 (>= 3.0) [amd64]

GCC support library

dep: libgcc-s1 (>= 3.5) [armhf]
dep: libstdc++6 (>= 5.2) [armhf]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 9) [amd64]
dep: murasaki-common

homology detection tool across multiple large genomes (common files)

murasaki herunterladen

Download für alle verfügbaren Architekturen
Architektur	Paketgröße	Größe (installiert)	Dateien
amd64	529,3 kB	3315 kB	[Liste der Dateien]
armhf	407,7 kB	1841 kB	[Liste der Dateien]

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