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[ Quellcode: boxshade  ]

Paket: boxshade (3.3.1-13)

Links für boxshade

boxshade

Trisquel-Ressourcen:

Quellcode-Paket boxshade herunterladen:

Betreuer:

Original Maintainers:

  • Debian Med Packaging Team (E-Mail-Archiv)
  • Steffen Moeller
  • Charles Plessy
  • Andreas Tille

Externe Ressourcen:

Ähnliche Pakete:

Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

Andere Pakete mit Bezug zu boxshade

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
    dep: libc6 (>= 2.7) [armhf]
  • sug: kalign
    Global and progressive multiple sequence alignment
    oder clustalw
    global multiple nucleotide or peptide sequence alignment
    oder mafft
    Multiple alignment program for amino acid or nucleotide sequences
    oder hmmer
    profile hidden Markov models for protein sequence analysis
  • sug: seaview
    Paket nicht verfügbar
  • sug: texlive-latex-extra
    TeX Live: LaTeX additional packages
  • sug: xfig
    Facility for Interactive Generation of figures under X11

boxshade herunterladen

Download für alle verfügbaren Architekturen
Architektur Paketgröße Größe (installiert) Dateien
amd64 54,5 kB165 kB [Liste der Dateien]
armhf 52,0 kB139 kB [Liste der Dateien]