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Paket: sniffles (1.0.7+ds-1)

structural variation caller using third-generation sequencing

Sniffles is a structural variation caller using third-generation sequencing data such as those from Pacific Biosciences or Oxford Nanopore platforms. It detects all types of SVs using evidence from split-read alignments, high-mismatch regions, and coverage analysis.

Andere Pakete mit Bezug zu sniffles

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  • dep: libbamtools2.4.0
    dynamic library for manipulating BAM (genome alignment) files
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • sug: bwa
    Burrows-Wheeler Aligner

sniffles herunterladen

Download für alle verfügbaren Architekturen
Architektur Paketgröße Größe (installiert) Dateien
amd64 175,6 kB584 kB [Liste der Dateien]
i386 189,1 kB607 kB [Liste der Dateien]