[ Quellcode: miniasm ]
Paket: miniasm (0.2+dfsg-2)
Links für miniasm
Trisquel-Ressourcen:
Quellcode-Paket miniasm herunterladen:
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Sascha Steinbiss
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
ultrafast de novo assembler for long noisy DNA sequencing reads
Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.
Andere Pakete mit Bezug zu miniasm
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
- dep: libc6 (>= 2.4) [i386]
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
-
- rec: minimap
- tool for approximate mapping of long biosequences such as DNA reads
miniasm herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 28,6 kB | 70 kB | [Liste der Dateien] |
| i386 | 29,5 kB | 70 kB | [Liste der Dateien] |