Skip to content
Sections
>> Trisquel >> Pakete >> etiona >> science >> meryl
etiona  ] [  aramo  ]
[ Quellcode: kmer  ]

Paket: meryl (0~20150903+r2013-3)

in- and out-of-core kmer counting and utilities

meryl computes the kmer content of genomic sequences. Kmer content is represented as a list of kmers and the number of times each occurs in the input sequences. The kmer can be restricted to only the forward kmer, only the reverse kmer, or the canonical kmer (lexicographically smaller of the forward and reverse kmer at each location). Meryl can report the histogram of counts, the list of kmers and their counts, or can perform mathematical and set operations on the processed data files.

This package is part of the Kmer suite.

Andere Pakete mit Bezug zu meryl

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
    dep: libc6 (>= 2.7) [i386]
  • dep: libgcc1 (>= 1:3.0) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.2) [i386]
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3

meryl herunterladen

Download für alle verfügbaren Architekturen
Architektur Paketgröße Größe (installiert) Dateien
amd64 190,9 kB1433 kB [Liste der Dateien]
i386 241,7 kB1953 kB [Liste der Dateien]