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[ Quellcode: iva  ]

Paket: iva (1.0.9+ds-4ubuntu1)

Links für iva

iva

Trisquel-Ressourcen:

Quellcode-Paket iva herunterladen:

Betreuer:

Original Maintainers:

  • Debian Med Packaging Team (E-Mail-Archiv)
  • Andreas Tille
  • Jorge Soares
  • Sascha Steinbiss

Externe Ressourcen:

Ähnliche Pakete:

iterative virus sequence assembler

IVA is a de novo assembler designed to assemble virus genomes that have no repeat sequences, using Illumina read pairs sequenced from mixed populations at extremely high depth.

IVA's main algorithm works by iteratively extending contigs using aligned read pairs. Its input can be just read pairs, or additionally you can provide an existing set of contigs to be extended. Alternatively, it can take reads together with a reference sequence.

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