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[ Quellcode: fermi-lite  ]

Paket: fml-asm (0.1-4)

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fml-asm

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Quellcode-Paket fermi-lite herunterladen:

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tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

Andere Pakete mit Bezug zu fml-asm

  • hängt ab von
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  • schlägt vor
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

fml-asm herunterladen

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