Paket: libmems-1.6-dev (1.6.0+4725-4build1)

Links für libmems-1.6-dev

Trisquel-Ressourcen:

Quellcode-Paket libmems herunterladen:

Betreuer:

Debian Med Packaging Team (E-Mail-Archiv)

Original Maintainers:

Debian Med Packaging Team (E-Mail-Archiv)
Andreas Tille

Externe Ressourcen:

Homepage [sourceforge.net]

development library to support DNA string matching and comparative genomics

libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements.

This is the development package containing the statically linked library and the header files.

Pakete, die libmems-1.6-dev bereitstellen

libmems-1.6-dev: development library to support DNA string matching and comparative genomics

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dep: libboost-filesystem1.65-dev

filesystem operations (portable paths, iteration over directories, etc) in C++
dep: libboost-iostreams1.65-dev

Boost.Iostreams Library development files
dep: libboost-system1.65-dev

Operating system (e.g. diagnostics support) library
dep: libgenome-1.3-dev

toolkit for developing bioinformatic related software (devel)
dep: libmems-1.6-1v5 (= 1.6.0+4725-4build1)

library to support DNA string matching and comparative genomics
dep: libmuscle-3.7-dev

multiple alignment development library for protein sequences

libmems-1.6-dev herunterladen

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