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[ Quellcode: seqmagick  ]

Paket: seqmagick (0.8.4-3)

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seqmagick

Trisquel-Ressourcen:

Quellcode-Paket seqmagick herunterladen:

Betreuer:

Original Maintainers:

  • Debian Med Packaging Team (E-Mail-Archiv)
  • Andreas Tille
  • Étienne Mollier

Externe Ressourcen:

Ähnliche Pakete:

imagemagick-like frontend to Biopython SeqIO

Seqmagick is a little utility to expose the file format conversion in BioPython in a convenient way.

Features include:

 * Modifying sequences:
   - Remove gaps
   - Reverse & reverse complement
   - Trim to a range of residues
   - Change case
   - Sort by length or ID
 * Displaying information about sequence files
 * Subsetting sequence files by:
   - Position
   - ID
   - Deduplication
 * Filtering sequences by quality score
 * Trimming alignments to a region of interest defined by the forward
   and reverse primers

Andere Pakete mit Bezug zu seqmagick

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-biopython
    Python3 library for bioinformatics
  • dep: python3-pygtrie
    Python library implementing a trie data structure (Python 3)

seqmagick herunterladen

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