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Paket: r-bioc-scater (1.22.0+ds-1)

Single-Cell Analysis Toolkit for Gene Expression Data in R

A collection of tools for doing various analyses of single-cell RNA-seq gene expression data, with a focus on quality control and visualization.

Andere Pakete mit Bezug zu r-bioc-scater

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  • sug: r-bioc-biobase
    base functions for Bioconductor
  • sug: r-bioc-biocstyle
    standard styles for vignettes and other Bioconductor documents
  • sug: r-bioc-biomart
    GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
  • sug: r-bioc-scrnaseq
    Collection of Public Single-Cell RNA-Seq Datasets
  • sug: r-cran-cowplot
    GNU R streamlined plot theme and plot annotations for 'ggplot2'
  • sug: r-cran-knitr
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-nmf
    GNU R framework to perform non-negative matrix factorization
  • sug: r-cran-pheatmap
    GNU R package to create pretty heatmaps
  • sug: r-cran-rmarkdown
    convert R markdown documents into a variety of formats
  • sug: r-cran-robustbase
    GNU R package providing basic robust statistics
  • sug: r-cran-testthat
    GNU R testsuite
  • sug: r-cran-uwot
    GNU R uniform manifold approximation and projection (UMAP)

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