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Paket: gromacs-mpi (2021.4-2)

Molecular dynamics sim, binaries for MPI parallelization

GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.

It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers.

This package contains only the core simulation engine with parallel support using the default MPI interface on the chosen architecture. It is suitable for nodes of a processing cluster, or for multiprocessor machines.

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  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
  • dep: libfftw3-double3 (>= 3.3.5)
    Library for computing Fast Fourier Transforms - Double precision
  • dep: libfftw3-single3 (>= 3.3.5)
    Library for computing Fast Fourier Transforms - Single precision
  • dep: libgcc-s1 (>= 3.3.1) [nicht armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libhwloc15 (>= 2.6.0)
    Hierarchical view of the machine - shared libs
  • dep: libopenmpi3 (>= 4.1.0)
    high performance message passing library -- shared library
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: mpi-default-bin
    Standard MPI runtime programs (metapackage)
  • dep: sse4.2-support [amd64]
    prevent installation on processors without required instructions
  • dep: zlib1g (>= 1:1.2.0)
    compression library - runtime
  • rec: gromacs
    Molecular dynamics simulator, with building and analysis tools
  • sug: gromacs-data
    GROMACS molecular dynamics sim, data and documentation

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Download für alle verfügbaren Architekturen
Architektur Paketgröße Größe (installiert) Dateien
amd64 7.071,1 kB17283 kB [Liste der Dateien]
arm64 6.348,9 kB13457 kB [Liste der Dateien]
armhf 3.813,4 kB9007 kB [Liste der Dateien]
ppc64el 5.218,7 kB13429 kB [Liste der Dateien]