pymvpa2 (2.6.4-2) unstable; urgency=medium * patches to fortify scatter code and tests against degenerate cases which reveal themselves on exotic platforms (Now should really Closes: #880793). ref: https://github.com/numpy/numpy/issues/10496 -- Yaroslav Halchenko Wed, 31 Jan 2018 11:09:23 -0500 pymvpa2 (2.6.4-1) unstable; urgency=medium * Fresh upstream bugfix release * Manually create simple smlrc.so and svmc.so symlinks to multiarch .so. Apparently numpy.ctypeslib.load_library is not creating a valid multiarch suffix to match the one created by dh_python2 * debian/rules - run tests under fixed MVPA_SEED=1 to avoid surprises, so should resolve spurious FTBFS (tried to close #880793) -- Yaroslav Halchenko Mon, 29 Jan 2018 15:15:50 -0500 pymvpa2 (2.6.3-1) unstable; urgency=medium * Fresh bugfix release -- primarily just tests -- Yaroslav Halchenko Fri, 03 Nov 2017 00:47:56 -0400 pymvpa2 (2.6.2-1) unstable; urgency=medium * Fresh upstream bugfix release - dropping all debian/patches/00* picked up from upstream -- Yaroslav Halchenko Wed, 01 Nov 2017 00:06:43 -0400 pymvpa2 (2.6.1-2) unstable; urgency=medium * Upload to unstable * debian/patches/00* - addressing for changes in sphinx - addressing for more strict numpy 1.13.1 * debian/control - boosted policy to 4.0.0 - boosted compat/debhelper to 9 - added dh-python to build-depends -- Yaroslav Halchenko Tue, 17 Oct 2017 22:53:34 -0400 pymvpa2 (2.6.1-1) experimental; urgency=medium * Fresh upstream (primarily minor bugfix) release - python-mock into build-depends * debian/rules - invoke tests via python -m nose since otherwise lead to some weird infinite recursions etc -- Yaroslav Halchenko Thu, 20 Apr 2017 11:24:40 -0400 pymvpa2 (2.6.0-1) unstable; urgency=medium * Fresh upstream release - variety of bugfixes, e.g. compatibility with scipy 0.17.1, nibabel 2.1 * debian/control - policy boost to 3.9.8 -- Yaroslav Halchenko Fri, 26 Aug 2016 20:21:05 -0400 pymvpa2 (2.5.0-2) unstable; urgency=medium * debian/control - swap order of swig2.0 and swig in build-depends to please buildds (Closes: #830394) -- Yaroslav Halchenko Fri, 08 Jul 2016 09:33:17 -0400 pymvpa2 (2.5.0-1) unstable; urgency=medium * Fresh upstream feature release -- Yaroslav Halchenko Wed, 11 May 2016 16:55:18 -0400 pymvpa2 (2.4.3-1) unstable; urgency=medium * debian/control - recommends python-duecredit - do not require (absent atm) optional statsmodels on s390x -- Yaroslav Halchenko Mon, 14 Mar 2016 20:59:58 -0400 pymvpa2 (2.4.2-1) unstable; urgency=medium * Fresh upstream release - compatible with swig 3 (Closes: #817000) * debian/control - boosted policy to 3.9.7 - relaxed build-depends -- Yaroslav Halchenko Mon, 07 Mar 2016 20:35:31 -0500 pymvpa2 (2.4.1-1) unstable; urgency=medium * Fresh upstream release * debian/{control,rules} - Use swig2.0 (or swig3.0 < 3.0.5). See https://github.com/swig/swig/issues/563 -- Yaroslav Halchenko Wed, 18 Nov 2015 13:24:34 -0500 pymvpa2 (2.4.0.1-1) unstable; urgency=medium * Upstream snapshot release - addresses compatibility issue with recent scipy * debian/patches/0001-BF-allow-to-compare-SmartVersion-None.patch - CPed from PR to resolve failing test whenever IPython is N/A -- Yaroslav Halchenko Wed, 21 Oct 2015 11:46:49 -0500 pymvpa2 (2.4.0-1) unstable; urgency=medium * New upstream yet to be released release - drop support of Python 2.6 * debian/control - boosted policy to 3.9.6 - added statsmodels to build-depends and recommends, joblib to recommends - recommend python-shogun instead of dated shogun-python-modular -- Yaroslav Halchenko Sun, 10 May 2015 22:06:33 +0100 pymvpa2 (2.3.1-2) unstable; urgency=medium * debian/patches - changeset_f12e1c41b7cf6b59b686c8f78d55ffba1eced8e1.diff + debian/rules changes to cache intersphinx mappings under debian/intersphinx (Closes: #765300). Thanks Sandro Tosi for the report and pointers to the resolution - changeset_5f62f33a7d84dca01c2aae69a4d4c0a00469ae7b.diff to fix up url to the h5py intersphinx * debian/upstream -> debian/upstream/metadata * debian/patches - deb_no_twitter_privacy_breach -- just refer to twitter instead -- Yaroslav Halchenko Tue, 28 Oct 2014 11:56:59 -0400 pymvpa2 (2.3.1-1) unstable; urgency=medium * Fresh upstream release (should be tollerant now to scipy API change in 1.4.0) * debian/watch - adjusted to monitor/fetch from github tags * debian/patches - all removed * debian/{control,rules} - use dh_python2 instead of deprecated pysupport - add matplotlib to build-depends and set its backend to Agg during testing -- Yaroslav Halchenko Tue, 20 May 2014 08:43:24 -0400 pymvpa2 (2.3.0-3) unstable; urgency=low * debian/control - man2html to build-depends * debian/patches - 2.3.0-37-g269c43c.diff to resolve FTBFS on trusty -- Yaroslav Halchenko Thu, 01 May 2014 14:23:56 -0400 pymvpa2 (2.3.0-1) unstable; urgency=low * Perspective fresh upstream release - contains all patches from under debian/patches/ so those are dropped * debian/control - recommend python-nipy * debian/rules - do not compress .sh scripts (cmdline examples) -- Yaroslav Halchenko Wed, 05 Mar 2014 23:00:31 +0100 pymvpa2 (2.2.0-4) unstable; urgency=low * debian/control: - specify git branch for debian packaging of pymvpa2. Thanks Julien Cristau for the report - build-depends on python-numpydoc - recommend python-pprocess (removed from the Debian archive since we missed a dependency on it and otherwise was unused, but is present from NeuroDebian ) - policy boosted to 3.9.5 (no changes) * debian/rules: - mkdir target -lib directories before moving .so files. It should resolve FTBFS with debhelper 9.20130507 and robustify build - quote paths with globs to avoid their expansion in find command. Thanks Julien Cristau for the hint -- Yaroslav Halchenko Thu, 12 Dec 2013 08:55:02 -0500 pymvpa2 (2.2.0-3) unstable; urgency=low * debian/patches - changeset_bab55a4a390c9c4b337ead5877868f7f7debc208.diff Tollerate "Probabalistic" (mention the typo) and "fixed" FSL atlases -- Yaroslav Halchenko Mon, 06 May 2013 15:02:58 -0400 pymvpa2 (2.2.0-2) unstable; urgency=low * debian/patches - changeset_79bc8ecad13fe43447f8a262ed03147cbe7da326.diff changeset_cdba16f73f5aa74cf3002f027a1d38e408b0361b.diff Address numpy 1.7.1 compatibility in unittests -- Yaroslav Halchenko Tue, 30 Apr 2013 11:35:24 -0400 pymvpa2 (2.2.0-1) unstable; urgency=low * Fresh upstream release: - provides tutorial (in -doc package) as ipython notebooks. Added ipython-notebook into Suggests - all cmdline tools have disambiguating prefix thus are installed now without conflict with pymvpa (0.4.x) package. * Dropping support of python 2.5 (failing tests) -- added X-Python-Version -- Yaroslav Halchenko Sun, 16 Sep 2012 06:23:51 -0400 pymvpa2 (2.1.0-1) unstable; urgency=low * Fresh upstream release * debian/control - unwrapped Depends/Recommends and sorted - moved python-lxml and python-sklearn into Recommends - added liblapack-dev into Recommends -- provides liblapack.so optionally used by Hyperalignment * debian/upstream -- added with a canonical reference -- Yaroslav Halchenko Thu, 28 Jun 2012 13:28:19 -0400 pymvpa2 (2.0.1-1) unstable; urgency=low * Fresh upstream release - all debian/patches were upstreamed * debian/control - policy boosted to 3.9.3 (no changes) * debian/copyright - updated for DEP5 v1.0 * debian/rules - added a call to dh_numpy where available for proper NumPy dependencies -- Yaroslav Halchenko Tue, 27 Mar 2012 09:47:23 -0400 pymvpa2 (2.0.0-6) unstable; urgency=low * Fixed FTBFS due to sphinx API changes braking old copy of autosummary. System-wide autosummary should be used now for sphinx >= 1.1.2 (Closes: #658593). Thanks to Jakub Wilk and Julian Taylor for help Patch: up_sphinx_1.1.2_autosummary -- Yaroslav Halchenko Tue, 07 Feb 2012 11:16:39 -0500 pymvpa2 (2.0.0-5) unstable; urgency=low * Fixed FTBFS due to test failure in test_niftidataset on big-endians. Patch: 0001-BF-assure-native-endianness-in-test_assumptions_on_n.patch * Fixed oblivious typo of removing system-installed underscore.js leading to stall and thus FTBFS on Debian build hosts * Run unittests with verbose output for easy troubleshooting of FTBFSs -- Yaroslav Halchenko Tue, 27 Dec 2011 16:26:12 -0500 pymvpa2 (2.0.0-4) unstable; urgency=low * debian/rules: export HOME=$(CURDIR)/build to assure rw $HOME for every aspect of package building (finally Closes:#652903) -- Yaroslav Halchenko Thu, 22 Dec 2011 23:03:26 -0500 pymvpa2 (2.0.0-3) unstable; urgency=low * Add up_robust_doc_building to the patch queue series (really Closes: #652903) -- Yaroslav Halchenko Thu, 22 Dec 2011 10:38:37 -0500 pymvpa2 (2.0.0-2) unstable; urgency=low * up_robust_doc_building patch to point HOME to build/ directory (Closes: #652903) -- Yaroslav Halchenko Wed, 21 Dec 2011 18:34:32 -0500 pymvpa2 (2.0.0-1) unstable; urgency=low * Long-awaited upstream release of mvpa2 * Removed conflict with python-mvpa-lib -- both python-mvpa and python-mvpa2 must be co-installable now * Reincrarnated -doc package providing HTML documentation -- Yaroslav Halchenko Thu, 15 Dec 2011 18:32:02 -0500 pymvpa2 (2.0.0~rc5-1) unstable; urgency=low * mvpa module was renamed into mvpa2 to allow co-installability with stable mvpa 0.4.x (hence source package name change) * Command line tools (atlaslabeler, mvpa-prep-fmri) are not provided for this release * Bump Standards-Version to 3.9.2 -- no changes necessary -- Yaroslav Halchenko Wed, 19 Oct 2011 14:18:14 -0400 pymvpa-snapshot (0.6.0~rc4-1) neurodebian; urgency=low * PyMVPA development snapshot. * Pruned unneeded now XS-DM-Upload-Allowed. -- Yaroslav Halchenko Tue, 14 Jun 2011 21:03:07 -0400 pymvpa-snapshot (0.6.0~rc3-1) neurodebian; urgency=low * PyMVPA development snapshot. * Includes upstream changelog now. -- Yaroslav Halchenko Tue, 12 Apr 2011 12:08:15 -0400 pymvpa-snapshot (0.6.0~rc2-1) neurodebian; urgency=low * PyMVPA development snapshot. -- Michael Hanke Thu, 03 Mar 2011 16:06:46 -0500 pymvpa (0.4.3-2) unstable; urgency=low [ Sandro Tosi ] * Drop Python 2.4; thanks to Luca Falavigna for the report and to Jakub Wilk for the patch (Closes: #562482) - debian/control + bump b-d on python-all-dev to '>= 2.5' + drop python-ctypes + drop explicit Depends on python: we use ${python:Depends} - debian/pyversions + bump it to '+2.5-' [ Yaroslav Halchenko ] * debian/control - Thanks Sandro Tosi for NMU attempt to fix #560606. - Build-Conflict on python-epydoc=3.0.1-4: this version works incorrectly with python-docutils 0.6 (thanks to Lucas Nussbaum for the report). Also Build-Depends on python-docutils (<< 0.6) | python-docutils (>= 0.6-3~) which would assure that we still can build on lenny or with fresh docutils which pull in fresh epydoc (thanks to Jakub Wilk for suggestion). Those 2 steps fix the FTBFS (Closes: #560606) - Added python-mvpa-doc to suggests. * Cherry pick 2 commits from maint/0.4 branch to be compatible with recent versions of shogun-python-modular present in sid/squeeze. -- Yaroslav Halchenko Tue, 12 Jan 2010 17:55:55 -0500 pymvpa (0.4.3-1) unstable; urgency=low * New upstream release. * Bump Standards-Version to 3.8.3 -- no changes necessary. * Maintainer field points to ExpPsy Maintainers now. * Recommend python-reportlab. * Added python-nose, python-nifti, python-lxml to Build-depends. -- Yaroslav Halchenko Fri, 04 Sep 2009 16:18:54 -0400 pymvpa (0.4.2-1) unstable; urgency=low [ Michael Hanke ] * New upstream release. * Removing the circular dependency between python-mvpa and python-mvpa-lib (Closes: #519129). * Improve long description of python-mvpa-lib and turn it into complete sentences, as recommended by the developers reference 6.2.3 (Closes: #521332). * Bump Standards-Version to 3.8.1 -- no changes necessary. * Added dependency on python to the python-mvpa package to satisfy lintian. * Added rsync as build-dependency, which is required for building the docs. * The package now honors 'nodoc' in DEB_BUILD_OPTIONS. This is intended to help backporting to releases with insufficient python-sphinx versions. * Added 'graphviz' as a build-dependency (necessary for Sphinx' inheritance graphs). [ Yaroslav Halchenko ] * Compatible with cdbs >= 0.4.54 (use of DEB_PYTHON_MODULE_PACKAGES) and recent pysupport (>=0.9). * Run unittests for each supported python version during build. -- Michael Hanke Mon, 25 May 2009 11:21:39 +0200 pymvpa (0.4.1-1) unstable; urgency=low [ Michael Hanke ] * New upstream release. * Added missing ${misc:Depends} to debian/control. * The package now honors 'nocheck' in DEB_BUILD_OPTIONS. * Speed-up of package build process by preventing the docs from being built twice. * Added 'DM-Upload-Allowed: yes' to enable DM upload. * Install new manpages and add build-dep. to help2man. * Updated debian/copyright. * Imported various bugfixes from the upstream VCS that were pushed into the 0.4 maintenance branch since the release of 0.4.1. [ Yaroslav Halchenko ] * Adjusted long descriptions. * Split libraries (low-level SMLR implementation and LIBSVM custom Python bindings) into a separate python-mvpa-lib package. That allows python-mvpa package to become architecture independent. -- Michael Hanke Sat, 21 Feb 2009 14:07:55 +0100 pymvpa (0.4.0-1) unstable; urgency=low * New upstream release. * Running a subset of the unittests during package build (only tests not requiring a huge amount of cpu-time or memory. -- Michael Hanke Wed, 19 Nov 2008 03:30:53 +0100 pymvpa (0.3.1-1) unstable; urgency=low * New upstream release. * Added dependency to ctypes for python 2.4. -- Michael Hanke Sun, 14 Sep 2008 13:53:31 +0200 pymvpa (0.3.0-1) unstable; urgency=low * New upstream release. * Added python-pywt as recommended package. * Using jquery.js from corresponding Debian package. -- Michael Hanke Sun, 17 Aug 2008 20:56:26 +0200 pymvpa (0.2.2-1) unstable; urgency=low * New upstream maintenance release (missed 0.2.1). This release contains a minimal copy of LIBSVM. The Debian package does not build it, but makes use of the corresponding Debian package. * Shrink Debian diff and move the enabling of LIBSVM into debian/rules. * Convert debian/copyright into machine readable format. * Bump Standards-Version to 3.8.0 -- no changes necessary. * Adjusted list of recommended and suggested packages to the new capabilities of PyMVPA, i.e. add SciPy, MDP, Shogun and Matplotlib. -- Michael Hanke Thu, 03 Jul 2008 10:04:40 +0200 pymvpa (0.2.0-1) unstable; urgency=low * New upstream release. * Added build-dependency to python-ctypes for a new classifier extension. * Added watch file. * Move from python-docutils to python-sphinx for building the package docs. * Disable libsvm setting check and add setup.cfg to permanently enable building the libsvm wrapper for Debian. -- Michael Hanke Thu, 29 May 2008 08:13:14 +0200 pymvpa (0.1.0-1) unstable; urgency=low * Initial release (Closes: #466556). -- Michael Hanke Tue, 19 Feb 2008 16:10:05 +0100