Пакет: tandem-mass (1:20170201.1-1)

Връзки за tandem-mass

Ресурси за Trisquel:

Изтегляне на пакет-източник tandem-mass.

Отговорник:

The Debichem Group (Пощенски архив)

Original Maintainers:

The Debichem Group (Пощенски архив)
Filippo Rusconi

Външни препратки:

Начална страница [www.thegpm.org]

Подобни пакети:

mass spectrometry software for protein identification

X! Tandem can match tandem mass spectra with peptide sequences, in a process that is commonly used to perform protein identification.

This software has a very simple, unsophisticated application programming interface (API): it simply takes an XML file of instructions on its command line, and outputs the results into an XML file, which has been specified in the input XML file. The output file format is described at http://www.thegpm.org/docs/X_series_output_form.pdf.

Unlike some earlier generation search engines, all of the X! Series search engines calculate statistical confidence (expectation values) for all of the individual spectrum-to-sequence assignments. They also reassemble all of the peptide assignments in a data set onto the known protein sequences and assign the statistical confidence that this assembly and alignment is non-random. The formula for which can be found here. Therefore, separate assembly and statistical analysis software, e.g. PeptideProphet and ProteinProphet, do not need to be used.

Други пакети, свързани с tandem-mass

зависимости

препоръчани

предложени

dep: libc6 (>= 2.14) [amd64]

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb

dep: libc6 (>= 2.7) [i386]
dep: libexpat1 (>= 2.0.1)

XML parsing C library - runtime library
dep: libgcc1 (>= 1:3.0)

GCC support library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3

Изтегляне на tandem-mass

Изтегляне за всички налични архитектури
Архитектура	Големина на пакета	Големина след инсталиране	Файлове
amd64	216,9 кБ	651 кБ	[списък на файловете]
i386	244,2 кБ	706 кБ	[списък на файловете]

Sections