Пакет: libfreecontact0v5 (1.0.21-6build2)
Връзки за libfreecontact0v5
Ресурси за Trisquel:
Изтегляне на пакет-източник freecontact.
- [freecontact_1.0.21-6build2.dsc]
- [freecontact_1.0.21.orig.tar.xz]
- [freecontact_1.0.21-6build2.debian.tar.xz]
Отговорник:
Original Maintainers:
- Debian Med Packaging Team (Пощенски архив)
- Laszlo Kajan
- Andreas Tille
Външни препратки:
- Начална страница [rostlab.org]
Подобни пакети:
fast protein contact predictor library
FreeContact is a protein residue contact predictor optimized for speed. Its input is a multiple sequence alignment. FreeContact can function as an accelerated drop-in for the published contact predictors EVfold-mfDCA of DS. Marks (2011) and PSICOV of D. Jones (2011).
FreeContact is accelerated by a combination of vector instructions, multiple threads, and faster implementation of key parts. Depending on the alignment, 8-fold or higher speedups are possible.
A sufficiently large alignment is required for meaningful results. As a minimum, an alignment with an effective (after-weighting) sequence count bigger than the length of the query sequence should be used. Alignments with tens of thousands of (effective) sequences are considered good input.
jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite can be used to generate the alignments, for example.
This package contains the shared library implementing freecontact.
Други пакети, свързани с libfreecontact0v5
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- или libblas.so.3
- виртуален пакет, предлаган от libatlas3-base, libblas3, libopenblas-base
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- dep: libc6 (>= 2.15)
- GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libgfortran4 (>= 7)
- Runtime library for GNU Fortran applications
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- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- или liblapack.so.3
- виртуален пакет, предлаган от libatlas3-base, liblapack3, libopenblas-base
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
Изтегляне на libfreecontact0v5
| Архитектура | Големина на пакета | Големина след инсталиране | Файлове |
|---|---|---|---|
| amd64 | 69,3 кБ | 178 кБ | [списък на файловете] |
| i386 | 58,6 кБ | 161 кБ | [списък на файловете] |