Skip to content
Sections
>> Trisquel >> Пакети >> etiona >> gnu-r >> r-bioc-dnacopy
etiona  ] [  nabia  ] [  aramo  ]
[ Източник: r-bioc-dnacopy  ]

Пакет: r-bioc-dnacopy (1.52.0-1)

R package: DNA copy number data analysis

Implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

This package is for analyzing array DNA copy number data, which is usually (but not always) called array Comparative Genomic Hybridization (array CGH) data It implements a methodology for finding change-points in these data which are points after which the (log) test over reference ratios have changed location. This model is that the change-points correspond to positions where the underlying DNA copy number has changed. Therefore, change-points can be used to identify regions of gained and lost copy number. Also provided is a function for making relevant plots of these data.

Други пакети, свързани с r-bioc-dnacopy

  • зависимости
  • препоръчани
  • предложени
  • dep: libc6 (>= 2.4)
    GNU C Library: Shared libraries
    също и виртуален пакет, предлаган от libc6-udeb
  • dep: libgfortran4 (>= 7)
    Runtime library for GNU Fortran applications
  • dep: r-api-3.4
    виртуален пакет, предлаган от r-base-core
  • dep: r-base-core (>= 3.4.2-1ubuntu4)
    GNU R core of statistical computation and graphics system

Изтегляне на r-bioc-dnacopy

Изтегляне за всички налични архитектури
Архитектура Големина на пакета Големина след инсталиране Файлове
amd64 367,3 кБ480 кБ [списък на файловете]
i386 366,4 кБ479 кБ [списък на файловете]