Пакет: physamp (1.1.0-3)

Връзки за physamp

Ресурси за Trisquel:

Изтегляне на пакет-източник physamp.

Отговорник:

Debian Med Packaging Team (Пощенски архив)

Original Maintainers:

Debian Med Packaging Team (Пощенски архив)
Andreas Tille
Julien Dutheil

Външни препратки:

Начална страница [jydu.github.io]

Подобни пакети:

sample sequence alignment corresponding to phylogeny

The PhySamp package currently contains two programs: bppphysamp, which samples sequences according to their similarity, and bppalnoptim, which samples a sequence alignment by removing sequences in order to maximize the number of sites suitable for a given analysis. The bppalnoptim program has three running modes:

 * Interactive: the user will be iteratively proposed a set of choices
   for sequence removal, with their corresponding site gains. The
   procedure stops when the user does not want to remove more sequences,
   and the resulting filtered alignment is written.
 * Automatic: the user enters an a priori criterion for stopping
   the filtering procedure (for instance a minimum number of
   sequences to keep).
 * Diagnostic: this mode allows one to plot the trade-off curve, by
   showing the site gain as a function of the number of removed
   sequences.

Други пакети, свързани с physamp

зависимости

препоръчани

предложени

dep: libbpp-core4 (>= 2.4.1)

Bio++ Core library
dep: libbpp-phyl12 (>= 2.4.1)

Bio++ Phylogenetic library
dep: libbpp-seq12 (>= 2.4.1)

Bio++ Sequence library
dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
също и виртуален пакет, предлаган от libc6-udeb
dep: libgcc-s1 (>= 3.3.1)

GCC support library
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3

Изтегляне на physamp

Изтегляне за всички налични архитектури
Архитектура	Големина на пакета	Големина след инсталиране	Файлове
arm64	171,8 кБ	1633 кБ	[списък на файловете]

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