Package: velvetoptimiser (2.2.6-4)

Links for velvetoptimiser

Trisquel Resources:

Install using apturl
Entry at directory.fsf.org
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Download Source Package velvetoptimiser:

[velvetoptimiser_2.2.6-4.dsc]
[velvetoptimiser_2.2.6.orig.tar.gz]
[velvetoptimiser_2.2.6-4.debian.tar.xz]

Maintainer:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Tim Booth
Andreas Tille

External Resources:

Homepage [github.com]

Similar packages:

velvet-tests
velvet
velvet-long
shasta
bandage
python3-shasta-doc
python3-shasta
bandage-examples
wtdbg2
sga
wtdbg2-examples

automatically optimise Velvet do novo assembly parameters

VelvetOptimiser is a multi-threaded Perl script for automatically optimising the three primary parameter options (K, -exp_cov, -cov_cutoff) for the Velvet de novo sequence assembler.

Other Packages Related to velvetoptimiser

depends

recommends

suggests

dep: bioperl

Perl tools for computational molecular biology
dep: velvet

Nucleic acid sequence assembler for very short reads

Download velvetoptimiser

Download for all available architectures
Architecture	Package Size	Installed Size	Files
all	25.4 kB	92 kB	[list of files]

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