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Package: uncalled (2.2+ds1-1build1)

Utility for Nanopore Current Alignment to Large Expanses of DNA

Streaming algorithm for mapping raw nanopore signal to DNA references

Enables real-time enrichment or depletion on Oxford Nanopore Technologies (ONT) MinION runs via ReadUntil.

Also supports standalone signal mapping of fast5 reads

Other Packages Related to uncalled

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1) [arm64, ppc64el]
    GCC support library
    dep: libgcc-s1 (>= 3.4) [amd64]
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libhdf5-103-1
    HDF5 C runtime files - serial version
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (<< 3.11)
    dep: python3 (>= 3.10~)
  • dep: python3-numpy
    Fast array facility to the Python 3 language
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Download uncalled

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 552.8 kB1625 kB [list of files]
arm64 520.0 kB1413 kB [list of files]
armhf 532.3 kB1196 kB [list of files]
ppc64el 553.2 kB1653 kB [list of files]