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Package: sumaclust (1.0.36+ds-1)

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sumaclust

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Download Source Package sumaclust:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Tim Booth
  • Andreas Tille
  • Pierre Gruet

External Resources:

Similar packages:

fast and exact clustering of genomic sequences

With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumaclust is a program developed by the LECA. Sumaclust aims to cluster sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumaclust clusters sequences using the same clustering algorithm as UCLUST and CD- HIT. This algorithm is mainly useful to detect the 'erroneous' sequences created during amplification and sequencing protocols, deriving from 'true' sequences.

Other Packages Related to sumaclust

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.7) [armhf]
  • dep: libgomp1 (>= 6)
    GCC OpenMP (GOMP) support library
  • dep: libsuma1 (>= 1.0.35)
    shared library for sumatra and sumaclust

Download sumaclust

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 100.7 kB163 kB [list of files]
arm64 99.8 kB158 kB [list of files]
armhf 99.7 kB150 kB [list of files]
ppc64el 101.2 kB195 kB [list of files]