[ aramo ]
[ Source: readucks ]
Package: readucks (0.0.3-3)
Links for readucks
Trisquel Resources:
Download Source Package readucks:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Nilesh Patra
External Resources:
- Homepage [github.com]
Similar packages:
Nanopore read de-multiplexer (read demux -> readux -> readucks, innit)
This package is inspired by the demultiplexing options in porechop but without the adapter trimming options - it just demuxes. It uses the parasail library with its Python bindings to do pairwise alignment which provides a considerable speed up over the seqan library used by porechop due to its low-level use of vector processor instructions.
Other Packages Related to readucks
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-parasail
- Python3 bindings for the parasail C library
Download readucks
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 20.8 kB | 106 kB | [list of files] |