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Package: proalign (0.603-5)

Links for proalign

proalign

Trisquel Resources:

Download Source Package proalign:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Thorsten Alteholz

External Resources:

  • Homepage [loytynojalab.biocenter.helsinki.fi]

Similar packages:

Probabilistic multiple alignment program

ProAlign performs probabilistic sequence alignments using hidden Markov models (HMM). It includes a graphical interface (GUI) allowing to (i) perform alignments of nucleotide or amino-acid sequences, (ii) view the quality of solutions, (iii) filter the unreliable alignment regions and (iv) export alignments to other software.

ProAlign uses a progressive method, such that multiple alignment is created stepwise by performing pairwise alignments in the nodes of a guide tree. Sequences are described with vectors of character probabilities, and each pairwise alignment reconstructs the ancestral (parent) sequence by computing the probabilities of different characters according to an evolutionary model.

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Download proalign

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 162.3 kB182 kB [list of files]
arm64 162.3 kB182 kB [list of files]
armhf 162.3 kB182 kB [list of files]
ppc64el 162.3 kB182 kB [list of files]