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Package: meryl (0~20150903+r2013-8build2)

in- and out-of-core kmer counting and utilities

meryl computes the kmer content of genomic sequences. Kmer content is represented as a list of kmers and the number of times each occurs in the input sequences. The kmer can be restricted to only the forward kmer, only the reverse kmer, or the canonical kmer (lexicographically smaller of the forward and reverse kmer at each location). Meryl can report the histogram of counts, the list of kmers and their counts, or can perform mathematical and set operations on the processed data files.

This package is part of the Kmer suite.

Other Packages Related to meryl

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1) [not armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3

Download meryl

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 195.5 kB809 kB [list of files]
arm64 213.2 kB721 kB [list of files]
armhf 222.8 kB1239 kB [list of files]
ppc64el 235.9 kB1013 kB [list of files]