Package: mecat2 (0.0+git20200428.f54c542+ds-3)

Links for mecat2

Trisquel Resources:

Download Source Package mecat2:

Maintainer:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Shayan Doust

External Resources:

Homepage [github.com]

Similar packages:

ultra-fast and accurate de novo assembly tools for SMRT reads

An improved version of MECAT. It is an ultra-fast and accurate mapping and error correcting de novo assembly tools for single molecula sequencing (SMRT) reads. MECAT2 consists of the following three modules:

 1. mecat2map: a fast and accurate alignment tool for SMRT reads.
 2. mecat2cns: correct noisy reads based on their pairwise overlaps.
 3. fsa: a string graph based assembly tool.

Other Packages Related to mecat2

depends

recommends

suggests

dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libgcc-s1 (>= 3.0)

GCC support library
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 6)

GNU Standard C++ Library v3
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

Download mecat2

Download for all available architectures
Architecture	Package Size	Installed Size	Files
amd64	763.3 kB	4200 kB	[list of files]

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