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[ Source: maq  ]

Package: maq (0.7.1-9)

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maq

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Download Source Package maq:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Charles Plessy

External Resources:

Similar packages:

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Other Packages Related to maq

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.5) [armhf]
    GCC support library
    dep: libgcc-s1 (>= 4.2) [arm64, ppc64el]
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.2.3.3)
    compression library - runtime
  • sug: bwa
    Burrows-Wheeler Aligner
  • sug: samtools
    processing sequence alignments in SAM, BAM and CRAM formats

Download maq

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 273.4 kB520 kB [list of files]
arm64 264.2 kB496 kB [list of files]
armhf 264.4 kB451 kB [list of files]
ppc64el 298.3 kB624 kB [list of files]