[ aramo ]
[ Source: lighter ]
Package: lighter (1.1.2-6)
Links for lighter
Trisquel Resources:
Download Source Package lighter:
- [lighter_1.1.2-6.dsc]
- [lighter_1.1.2.orig-debian-tests-data.tar.gz]
- [lighter_1.1.2.orig.tar.gz]
- [lighter_1.1.2-6.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
- Nilesh Patra
External Resources:
- Homepage [github.com]
Similar packages:
fast and memory-efficient sequencing error corrector
Lighter is a fast, memory-efficient tool for correcting sequencing errors. Lighter avoids counting k-mers. Instead, it uses a pair of Bloom filters, one holding a sample of the input k-mers and the other holding k-mers likely to be correct. As long as the sampling fraction is adjusted in inverse proportion to the depth of sequencing, Bloom filter size can be held constant while maintaining near-constant accuracy. Lighter is parallelized, uses no secondary storage, and is both faster and more memory-efficient than competing approaches while achieving comparable accuracy.
Other Packages Related to lighter
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1) [not armhf]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libstdc++6 (>= 5)
- GNU Standard C++ Library v3
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download lighter
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 46.7 kB | 120 kB | [list of files] |
| arm64 | 45.7 kB | 108 kB | [list of files] |
| armhf | 47.1 kB | 99 kB | [list of files] |
| ppc64el | 50.4 kB | 180 kB | [list of files] |