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Package: libssu-tools (0.10.0-3build1)

high-performance phylogenetic diversity calculations (binaries)

The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.

This package contains target binaries ssu and faithpd

Other Packages Related to libssu-tools

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 4.2) [not amd64]
  • dep: libssu0
    high-performance phylogenetic diversity calculations (lib)
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: libsz2 (>= 1.0.6)
    Adaptive Entropy Coding library - SZIP
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Download libssu-tools

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 1,583.3 kB7182 kB [list of files]
arm64 1,535.6 kB7678 kB [list of files]
ppc64el 1,593.5 kB10426 kB [list of files]