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[ Source: hyphy  ]

Package: hyphy-mpi (2.5.36+dfsg-1)

Links for hyphy-mpi

hyphy-mpi

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Download Source Package hyphy:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Étienne Mollier
  • Nilesh Patra

External Resources:

Similar packages:

Hypothesis testing using Phylogenies (MPI version)

HyPhy is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It features a complete graphical user interface (GUI) and a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments (via message passing interface) and it can be compiled as a shared library and called from other programming environments such as Python or R. Continued development of HyPhy is currently supported in part by an NIGMS R01 award 1R01GM093939.

This package provides an executable using MPI to do multiprocessing.

Other Packages Related to hyphy-mpi

  • depends
  • recommends
  • suggests
  • dep: hyphy-common (= 2.5.36+dfsg-1)
    Hypothesis testing using Phylogenies (common files)
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libcurl3-gnutls (>= 7.16.2)
    easy-to-use client-side URL transfer library (GnuTLS flavour)
  • dep: libgcc-s1 (>= 3.3.1) [not armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libopenmpi3 (>= 4.1.2)
    high performance message passing library -- shared library
  • dep: libsqlite3-0 (>= 3.5.9)
    SQLite 3 shared library
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.2.11)
    compression library - runtime

Download hyphy-mpi

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 2,230.5 kB9082 kB [list of files]
arm64 1,117.6 kB2640 kB [list of files]
armhf 866.8 kB1527 kB [list of files]
ppc64el 1,242.8 kB3364 kB [list of files]