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[ Source: fastqc  ]

Package: fastqc (0.11.9+dfsg-5)

Links for fastqc

fastqc

Trisquel Resources:

Download Source Package fastqc:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Andreas Tille
  • Olivier Sallou

External Resources:

  • Homepage [www.bioinformatics.babraham.ac.uk]

Similar packages:

quality control for high throughput sequence data

FastQC aims to provide a simple way to do some quality control checks on raw sequence data coming from high throughput sequencing pipelines. It provides a modular set of analyses which you can use to give a quick impression of whether your data has any problems of which you should be aware before doing any further analysis.

The main functions of FastQC are

 * Import of data from BAM, SAM or FastQ files (any variant)
 * Providing a quick overview to tell you in which areas there may
   be problems
 * Summary graphs and tables to quickly assess your data
 * Export of results to an HTML based permanent report
 * Offline operation to allow automated generation of reports without
   running the interactive application

Other Packages Related to fastqc

  • depends
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Download fastqc

Download for all available architectures
Architecture Package Size Installed Size Files
all 361.5 kB564 kB [list of files]