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Package: damapper (0.0+git20210330.ab45103-1)

long read to reference genome mapping tool

Recognised as the Damapper Library, this is a long read to reference genome mapping command line tool.

For a given reference database 'X' and read block 'Y', damapper produces the single file 'Y.X.las'. Each output file is sorted in order of the A-reads, and if a match is a chain of local alignments, then the LA's in the chain occur in increasing order of A-coordinates.

HPC.damapper writes a UNIX shell script to the standard output that maps every read in blocks <first> to <last> of database <reads> to a reference sequence <ref>. If <last> is missing then only the single block <first> is mapped, and if <first> is also missing then all blocks of the database are mapped.

This package contains the damapper and HPC.damapper binaries.

Other Packages Related to damapper

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 63.8 kB160 kB [list of files]
arm64 62.1 kB140 kB [list of files]
armhf 104.4 kB218 kB [list of files]
ppc64el 77.3 kB236 kB [list of files]