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Package: ataqv (1.3.0+ds-1)

ATAC-seq QC and visualization

A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.

Other Packages Related to ataqv

  • depends
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  • sug: macs
    Model-based Analysis of ChIP-Seq on short reads sequencers
  • sug: picard-tools
    Command line tools to manipulate SAM and BAM files
  • sug: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • sug: wget
    retrieves files from the web

Download ataqv

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 3,345.8 kB6237 kB [list of files]
arm64 3,309.5 kB6060 kB [list of files]
armhf 3,316.2 kB5854 kB [list of files]
ppc64el 3,346.2 kB6465 kB [list of files]