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Package: amap-align (2.2+git20080214.600fc29+dfsg-2)

Protein multiple alignment by sequence annealing

AMAP is a command line tool to perform multiple alignment of peptidic sequences. It utilizes posterior decoding, and a sequence-annealing alignment, instead of the traditional progressive alignment method. It is the only alignment program that allows one to control the sensitivity / specificity tradeoff. It is based on the ProbCons source code, but uses alignment metric accuracy and eliminates the consistency transformation.

The Java visualisation tool of AMAP 2.2 is not yet packaged in Debian.

Other Packages Related to amap-align

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.27)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [not armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 5.2) [armhf]
    GNU Standard C++ Library v3
    dep: libstdc++6 (>= 9) [not armhf]

Download amap-align

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 129.9 kB1219 kB [list of files]
arm64 121.5 kB1178 kB [list of files]
armhf 107.2 kB1118 kB [list of files]
ppc64el 139.6 kB1230 kB [list of files]