[ Source: khmer ]
Package: khmer (2.1.2+dfsg-10)
Links for khmer
Trisquel Resources:
Download Source Package khmer:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Michael R. Crusoe
- Kevin Murray
External Resources:
- Homepage [khmer.readthedocs.org]
Similar packages:
in-memory DNA sequence kmer counting, filtering & graph traversal
khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.
Other Packages Related to khmer
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- dep: cython3
- C-Extensions for Python 3
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- dep: khmer-common
- common files for the khmer project tools
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- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1) [arm64]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [amd64]
-
- dep: libgomp1 (>= 4.9)
- GCC OpenMP (GOMP) support library
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11)
- dep: python3 (>= 3.9~)
-
- dep: python3-screed
- short nucleotide read sequence utils in Python 3
-
- dep: zlib1g (>= 1:1.2.3.4)
- compression library - runtime
Download khmer
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 6,968.2 kB | 33545 kB | [list of files] |
| arm64 | 6,894.1 kB | 32823 kB | [list of files] |