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Package: libhtscodecs2 (1.1.1-3)

Custom compression for CRAM and others

This library implements the custom CRAM codecs used for "EXTERNAL" block types. These consist of two variants of the rANS codec (8-bit and 16-bit renormalisation, with run-length encoding and bit-packing also supported in the latter), a dynamic arithmetic coder, and custom codecs for name/ID compression and quality score compression derived from fqzcomp.

They come with small command line test tools to act as both compression exploration programs and as part of the test harness.

Other Packages Related to libhtscodecs2

  • depends
  • recommends
  • suggests
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb

Download libhtscodecs2

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 52.0 kB119 kB [list of files]
arm64 54.5 kB110 kB [list of files]
armhf 52.4 kB90 kB [list of files]
ppc64el 78.2 kB210 kB [list of files]