[ aramo ]
[ Source: allelecount ]
Package: liballelecount-perl (4.3.0-1.1)
Links for liballelecount-perl
Trisquel Resources:
Download Source Package allelecount:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Homepage [github.com]
Similar packages:
Perl interface to NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings).
The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg.
This package provided the Perl interface to alleleCounter providing Sanger::CGP::AlleleCount::Genotype.
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Download liballelecount-perl
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 24.2 kB | 80 kB | [list of files] |