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[ Source: snpeff ]
Package: libsnpeff-java (5.1+dfsg-2)
Links for libsnpeff-java
Trisquel Resources:
Download Source Package snpeff:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
- Pierre Gruet
External Resources:
- Homepage [pcingola.github.io]
Similar packages:
genetic variant annotation and effect prediction toolbox - lib
SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes).
The inputs are predicted variants (SNPs, insertions, deletions and MNPs). The input file is usually obtained as a result of a sequencing experiment, and it is usually in variant call format (VCF).
SnpEff analyzes the input variants. It annotates the variants and calculates the effects they produce on known genes (e.g. amino acid changes).
This package contains the library.
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Download libsnpeff-java
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 1,611.1 kB | 11689 kB | [list of files] |