Skip to content
Sections
>> Trisquel >> Packages >> aramo >> gnu-r >> r-bioc-mutationalpatterns
aramo  ]
[ Source: r-bioc-mutationalpatterns  ]

Package: r-bioc-mutationalpatterns (3.4.0+dfsg-1)

GNU R comprehensive genome-wide analysis of mutational processes

This BioConductor package provides an extensive toolset for the characterization and visualization of a wide range of mutational patterns in base substitution catalogs.

Other Packages Related to r-bioc-mutationalpatterns

  • depends
  • recommends
  • suggests
  • sug: r-bioc-annotationdbi
    GNU R Annotation Database Interface for BioConductor
  • sug: r-bioc-biocstyle (>= 2.0.3)
    standard styles for vignettes and other Bioconductor documents
  • sug: r-bioc-biomart (>= 2.28.0)
    GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
  • sug: r-bioc-genomicfeatures
    GNU R tools for making and manipulating transcript centric annotations
  • sug: r-bioc-rtracklayer (>= 1.32.2)
    GNU R interface to genome browsers and their annotation tracks
  • sug: r-cran-gridextra (>= 2.2.1)
    GNU R package with extensions for the grid package
  • sug: r-cran-knitr
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-rmarkdown
    convert R markdown documents into a variety of formats
  • sug: r-cran-testthat
    GNU R testsuite

Download r-bioc-mutationalpatterns

Download for all available architectures
Architecture Package Size Installed Size Files
all 2,463.6 kB4589 kB [list of files]