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Package: fastq-pair (1.0-2)

Rewrites paired end fastq so all reads have a mate to separate out singletons

This package rewrites the fastq files with the sequences in order, with matching files for the two files provided on the command line, and then any single reads that are not matched are place in two separate files, one for each original file.

This code is designed to be fast and memory efficient, and works with large fastq files. It does not store the whole file in memory, but rather just stores the locations of each of the indices in the first file provided in memory.

Other Packages Related to fastq-pair

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.4) [armhf]

Download fastq-pair

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 7.1 kB32 kB [list of files]
arm64 6.9 kB27 kB [list of files]
armhf 6.9 kB23 kB [list of files]
ppc64el 7.9 kB80 kB [list of files]