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[ Source: bamclipper ]

Package: bamclipper (1.0.0-2)

Links for bamclipper

Trisquel Resources:

Download Source Package bamclipper:

Maintainer:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Andreas Tille

External Resources:

Homepage [github.com]

Similar packages:

Remove gene-specific primer sequences from SAM/BAM alignments

Remove gene-specific primer sequences from SAM/BAM alignments of PCR amplicons by soft-clipping.

bamclipper.sh soft-clips gene-specific primers from BAM alignment file based on genomic coordinates of primer pairs in BEDPE format.

Other Packages Related to bamclipper

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dep: parallel

build and execute command lines from standard input in parallel
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats

Download bamclipper

Download for all available architectures
Architecture	Package Size	Installed Size	Files
all	6.0 kB	29 kB	[list of files]